Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | BACDOR_04885 | Not Available | Positive | 5323330 - 5324142 | 30882.8 |
| putative alpha-1,2-mannosidase | BACDOR_04886 | Not Available | Positive | 5324207 - 5326495 | 86950.7 |
| polygalacturonase (pectinase) | BACDOR_04887 | Not Available | Positive | 5326521 - 5327933 | 52056.0 |
| putative alpha-1,2-mannosidase | BACDOR_04888 | Not Available | Positive | 5327936 - 5330215 | 86178.9 |
| histidine acid phosphatase | BACDOR_04889 | Not Available | Positive | 5330222 - 5331961 | 66815.9 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_04890 | Not Available | Negative | 5332210 - 5336250 | 153053.0 |
| hypothetical protein | BACDOR_04891 | Not Available | Positive | 5336464 - 5337963 | 56154.5 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_04892 | Not Available | Positive | 5337986 - 5341024 | 112415.0 |
| susd family protein | BACDOR_04893 | Not Available | Positive | 5341042 - 5342700 | 62999.9 |
| hypothetical protein | BACDOR_04894 | Not Available | Positive | 5342817 - 5344415 | 59665.7 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

