Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACDOR_04635 | Not Available | Negative | 5088037 - 5088159 | 4530.57 |
| susd family protein | BACDOR_04636 | Not Available | Negative | 5088385 - 5090439 | 78335.8 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_04637 | Not Available | Negative | 5090453 - 5093755 | 123417.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_04638 | Not Available | Positive | 5094033 - 5098076 | 152544.0 |
| gdsl-like protein | BACDOR_04639 | Not Available | Positive | 5098096 - 5099721 | 62040.2 |
| polysaccharide deacetylase | BACDOR_04640 | Not Available | Positive | 5099870 - 5101573 | 64709.2 |
| polygalacturonase (pectinase) | BACDOR_04641 | Not Available | Positive | 5101590 - 5103188 | 59523.0 |
| hypothetical protein | BACDOR_04642 | Not Available | Positive | 5103209 - 5105779 | 97914.0 |
| glycosyl hydrolase family 20, catalytic domain protein | BACDOR_04643 | Not Available | Positive | 5105795 - 5107396 | 61082.5 |
| prtrc system thif family protein | BACDOR_04644 | Not Available | Negative | 5107493 - 5108281 | 29499.8 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

