Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase, iron-dependent | BACDOR_04605 | Not Available | Negative | 5056008 - 5057183 | 43369.5 |
| formate--tetrahydrofolate ligase | BACDOR_04606 | Not Available | Positive | 5057272 - 5058939 | 60530.0 |
| hypothetical protein | BACDOR_04608 | Not Available | Negative | 5058970 - 5059101 | 4795.11 |
| hypothetical protein | BACDOR_04607 | Not Available | Positive | 5059091 - 5059219 | 4775.28 |
| dna mismatch endonuclease vsr | BACDOR_04609 | Not Available | Positive | 5059321 - 5059557 | 9167.97 |
| peptidase, s9a/b/c family, catalytic domain protein | BACDOR_04610 | Not Available | Positive | 5059584 - 5062304 | 103210.0 |
| glycine dehydrogenase | BACDOR_04611 | Not Available | Negative | 5062588 - 5065437 | 105237.0 |
| metallo-beta-lactamase domain protein | BACDOR_04612 | Not Available | Negative | 5065473 - 5066111 | 23891.3 |
| 16s rrna methyltransferase gidb | BACDOR_04613 | Not Available | Negative | 5066132 - 5066758 | 23734.0 |
| hypothetical protein | BACDOR_04614 | Not Available | Negative | 5066779 - 5067627 | 32109.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

