Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase, type ii | BACDOR_04405 | Not Available | Positive | 4843785 - 4844903 | 40244.9 |
| hypothetical protein | BACDOR_04406 | Not Available | Positive | 4844992 - 4846161 | 44971.1 |
| hypothetical protein | BACDOR_04407 | Not Available | Positive | 4846232 - 4846573 | 13036.8 |
| nucleotidyltransferase domain protein | BACDOR_04408 | Not Available | Negative | 4846695 - 4847009 | 12046.8 |
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | BACDOR_04409 | Not Available | Negative | 4847131 - 4848309 | 41980.4 |
| phosphogluconate dehydrogenase (decarboxylating) | BACDOR_04410 | Not Available | Positive | 4848394 - 4849830 | 52889.7 |
| glucose-6-phosphate dehydrogenase | BACDOR_04411 | Not Available | Positive | 4849879 - 4851387 | 58036.4 |
| 6-phosphogluconolactonase | BACDOR_04412 | Not Available | Positive | 4851448 - 4852152 | 26259.2 |
| cytochrome d ubiquinol oxidase, subunit ii | BACDOR_04413 | Not Available | Negative | 4852448 - 4853593 | 42779.6 |
| bacterial cytochrome ubiquinol oxidase | BACDOR_04414 | Not Available | Negative | 4853657 - 4855159 | 55243.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

