Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | BACDOR_04395 | Not Available | Negative | 4833253 - 4833609 | 13522.4 |
| hypothetical protein | BACDOR_04396 | Not Available | Negative | 4833701 - 4834426 | 26012.1 |
| ll-diaminopimelate aminotransferase | BACDOR_04397 | Not Available | Negative | 4834526 - 4835755 | 45830.8 |
| diaminopimelate epimerase | BACDOR_04399 | Not Available | Negative | 4835802 - 4836644 | 30710.2 |
| hypothetical protein | BACDOR_04398 | Not Available | Positive | 4836622 - 4836762 | 5538.16 |
| abc transporter, atp-binding protein | BACDOR_04400 | Not Available | Positive | 4837028 - 4838476 | 55032.9 |
| dihydrodipicolinate synthetase family | BACDOR_04401 | Not Available | Positive | 4838639 - 4839571 | 33960.4 |
| transporter, sss family | BACDOR_04402 | Not Available | Positive | 4839585 - 4841018 | 52131.2 |
| oxidoreductase, 2-nitropropane dioxygenase family protein | BACDOR_04403 | Not Available | Negative | 4841221 - 4842204 | 35572.2 |
| transporter, anaerobic c4-dicarboxylate uptake (dcu) family | BACDOR_04404 | Not Available | Positive | 4842354 - 4843652 | 45850.3 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

