Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BACDOR_04335 | Not Available | Positive | 4770984 - 4771805 | 29522.8 |
| transporter, major facilitator family protein | BACDOR_04336 | Not Available | Positive | 4771774 - 4772988 | 45710.0 |
| atp-binding cassette protein, chvd family | BACDOR_04337 | Not Available | Positive | 4773069 - 4774757 | 63738.2 |
| hypothetical protein | BACDOR_04338 | Not Available | Positive | 4775109 - 4778450 | 123095.0 |
| hypothetical protein | BACDOR_04339 | Not Available | Positive | 4778542 - 4778694 | 5693.32 |
| hypothetical protein | BACDOR_04340 | Not Available | Negative | 4778789 - 4778932 | 5393.73 |
| hypothetical protein | BACDOR_04341 | Not Available | Positive | 4779221 - 4780084 | 33090.0 |
| dna (cytosine-5-)-methyltransferase | BACDOR_04342 | Not Available | Positive | 4780097 - 4781323 | 46534.0 |
| hypothetical protein | BACDOR_04343 | Not Available | Negative | 4781425 - 4781739 | 13009.3 |
| n-acetylmuramoyl-l-alanine amidase | BACDOR_04344 | Not Available | Negative | 4781910 - 4782326 | 15904.5 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

