Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BACDOR_04315 | Not Available | Positive | 4741321 - 4743654 | 87115.6 |
| kama family protein | BACDOR_04316 | Not Available | Negative | 4743743 - 4745854 | 82054.4 |
| hypothetical protein | BACDOR_04317 | Not Available | Negative | 4745929 - 4746138 | 8274.59 |
| hypothetical protein | BACDOR_04318 | Not Available | Positive | 4746174 - 4749485 | 126734.0 |
| alpha-l-rhamnosidase n-terminal domain protein | BACDOR_04319 | Not Available | Positive | 4749537 - 4752293 | 104297.0 |
| polygalacturonase (pectinase) | BACDOR_04320 | Not Available | Positive | 4752350 - 4753690 | 49776.0 |
| hypothetical protein | BACDOR_04321 | Not Available | Positive | 4753699 - 4755039 | 49812.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_04322 | Not Available | Negative | 4755501 - 4758638 | 120009.0 |
| hypothetical protein | BACDOR_04323 | Not Available | Positive | 4758954 - 4759790 | 32672.3 |
| hypothetical protein | BACDOR_04324 | Not Available | Positive | 4759874 - 4760473 | 21746.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

