Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor regulatory protein, fecr/pupr family | BACDOR_00399 | Not Available | Positive | 481114 - 482133 | 39119.9 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_00400 | Not Available | Positive | 482221 - 485790 | 132050.0 |
| susd family protein | BACDOR_00401 | Not Available | Positive | 485809 - 487686 | 70190.4 |
| putative pectate lyase | BACDOR_00402 | Not Available | Positive | 487779 - 489287 | 57180.5 |
| hypothetical protein | BACDOR_00403 | Not Available | Positive | 489293 - 491536 | 84499.1 |
| hypothetical protein | BACDOR_00404 | Not Available | Positive | 491625 - 493709 | 79883.2 |
| hypothetical protein | BACDOR_00405 | Not Available | Positive | 493983 - 496334 | 89761.5 |
| polygalacturonase (pectinase) | BACDOR_00406 | Not Available | Positive | 496398 - 497786 | 52158.9 |
| fg-gap repeat protein | BACDOR_00407 | Not Available | Positive | 497783 - 499690 | 70614.4 |
| glycosyl hydrolase, family 88 | BACDOR_00408 | Not Available | Positive | 499703 - 501118 | 53246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

