Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACDOR_04144 | Not Available | Positive | 4547776 - 4547907 | 5112.0 |
| Trna-gly | Not Available | Not Available | Positive | 4547920 - 4547995 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4548001 - 4548086 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | BACDOR_04147 | Not Available | Negative | 4548198 - 4548704 | 18015.5 |
| tetratricopeptide repeat protein | BACDOR_04148 | Not Available | Negative | 4548801 - 4549529 | 26493.7 |
| dna replication and repair protein recf | BACDOR_04149 | Not Available | Positive | 4549631 - 4550746 | 42953.6 |
| hypothetical protein | BACDOR_04150 | Not Available | Positive | 4550743 - 4551033 | 11249.9 |
| 5-formyltetrahydrofolate cyclo-ligase | BACDOR_04151 | Not Available | Negative | 4551206 - 4551685 | 18258.8 |
| peptidase, s41 family | BACDOR_04152 | Not Available | Negative | 4551660 - 4553381 | 63719.2 |
| cytidine and deoxycytidylate deaminase zinc-binding region | BACDOR_04153 | Not Available | Negative | 4553423 - 4553857 | 16211.4 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

