Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative shikimate dehydrogenase | BACDOR_03994 | Not Available | Negative | 4410860 - 4411600 | 27737.7 |
| ubiquinone/menaquinone biosynthesis methyltransferase | BACDOR_03995 | Not Available | Negative | 4411619 - 4412356 | 27935.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BACDOR_03996 | Not Available | Negative | 4412453 - 4413421 | 36843.4 |
| phoh family protein | BACDOR_03997 | Not Available | Negative | 4413418 - 4414422 | 37741.5 |
| hypothetical protein | BACDOR_03998 | Not Available | Positive | 4414670 - 4415254 | 21608.1 |
| trna pseudouridine synthase a | BACDOR_03999 | Not Available | Positive | 4415289 - 4416062 | 29802.4 |
| putative dna metabolism protein | BACDOR_04000 | Not Available | Negative | 4416028 - 4416795 | 30575.8 |
| putative dna modification/repair radical sam protein | BACDOR_04001 | Not Available | Negative | 4416792 - 4418135 | 51749.5 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | BACDOR_04002 | Not Available | Negative | 4418488 - 4419054 | 20612.2 |
| hypothetical protein | BACDOR_04003 | Not Available | Positive | 4419410 - 4419784 | 14063.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

