Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 8603 - 8918 | Not Available |
| endopeptidase clp | BACDOR_00011 | Not Available | Positive | 9180 - 9851 | 24894.8 |
| atp-dependent clp protease, atp-binding subunit clpx | BACDOR_00012 | Not Available | Positive | 10114 - 11226 | 41530.9 |
| atp-dependent dna helicase recq | BACDOR_00013 | Not Available | Positive | 11384 - 13564 | 81679.6 |
| hypothetical protein | BACDOR_00014 | Not Available | Negative | 13713 - 13853 | 5581.07 |
| inosine-5'-monophosphate dehydrogenase | BACDOR_00015 | Not Available | Positive | 13862 - 15337 | 52718.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 14739 - 14845 | Not Available |
| ppic-type ppiase domain protein | BACDOR_00016 | Not Available | Positive | 15348 - 16688 | 51909.5 |
| hypothetical protein | BACDOR_00017 | Not Available | Positive | 16725 - 17597 | 34092.5 |
| putative d-tyrosyl-trna(tyr) deacylase | BACDOR_00018 | Not Available | Positive | 17590 - 18960 | 52688.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

