Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | BACDOR_03944 | Not Available | Negative | 4363476 - 4363889 | 14910.1 |
| hypothetical protein | BACDOR_03945 | Not Available | Negative | 4364046 - 4365068 | 40101.1 |
| nitroreductase family protein | BACDOR_03946 | Not Available | Positive | 4365084 - 4365650 | 21254.9 |
| hypothetical protein | BACDOR_03947 | Not Available | Positive | 4365653 - 4365979 | 11898.3 |
| hypothetical protein | BACDOR_03948 | Not Available | Positive | 4365976 - 4366785 | 29887.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family | BACDOR_03949 | Not Available | Positive | 4366791 - 4367309 | 19153.2 |
| septum formation protein maf | BACDOR_03950 | Not Available | Positive | 4367327 - 4367908 | 21779.4 |
| 4-phosphoerythronate dehydrogenase | BACDOR_03951 | Not Available | Positive | 4367974 - 4368981 | 37594.3 |
| hypothetical protein | BACDOR_03953 | Not Available | Negative | 4368978 - 4370147 | 45887.7 |
| hypothetical protein | BACDOR_03952 | Not Available | Positive | 4370137 - 4370655 | 19816.9 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

