Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACDOR_03904 | Not Available | Positive | 4322552 - 4323841 | 48235.7 |
| apurinic endonuclease (apn1) | BACDOR_03905 | Not Available | Positive | 4323884 - 4324720 | 31472.6 |
| pyridoxal-phosphate dependent trpb-like enzyme | BACDOR_03906 | Not Available | Negative | 4325044 - 4326408 | 50210.1 |
| cation transport protein | BACDOR_03907 | Not Available | Positive | 4326586 - 4328433 | 68679.0 |
| trka n-terminal domain protein | BACDOR_03908 | Not Available | Positive | 4328436 - 4329122 | 25683.0 |
| hypothetical protein | BACDOR_03909 | Not Available | Positive | 4329338 - 4329907 | 21139.5 |
| hypothetical protein | BACDOR_03910 | Not Available | Positive | 4330000 - 4330440 | 16624.2 |
| l-serine ammonia-lyase | BACDOR_03911 | Not Available | Negative | 4330620 - 4331771 | 41863.8 |
| ser/thr phosphatase family protein | BACDOR_03912 | Not Available | Negative | 4331978 - 4333141 | 44647.1 |
| hypothetical protein | BACDOR_03913 | Not Available | Negative | 4333188 - 4334678 | 55036.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

