Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka c-terminal domain protein | BACDOR_03884 | Not Available | Positive | 4296022 - 4297884 | 67150.1 |
| mate efflux family protein | BACDOR_03885 | Not Available | Negative | 4297847 - 4299202 | 49642.3 |
| pyridine nucleotide-disulfide oxidoreductase | BACDOR_03886 | Not Available | Positive | 4299439 - 4301940 | 90556.4 |
| transcriptional regulator, marr family | BACDOR_03887 | Not Available | Positive | 4301947 - 4302303 | 13240.2 |
| putative atp synthase f0, a subunit | BACDOR_03888 | Not Available | Positive | 4302336 - 4303934 | 59680.1 |
| crispr-associated protein, csn1 family | BACDOR_03889 | Not Available | Positive | 4304119 - 4308633 | 175991.0 |
| hypothetical protein | BACDOR_03890 | Not Available | Positive | 4308648 - 4309646 | 38475.0 |
| crispr-associated endonuclease cas1, nmeni subtype | BACDOR_03891 | Not Available | Positive | 4309673 - 4310605 | 35084.8 |
| crispr-associated endoribonuclease cas2 | BACDOR_03892 | Not Available | Positive | 4310605 - 4310937 | 12889.6 |
| hypothetical protein | BACDOR_03893 | Not Available | Positive | 4311494 - 4311616 | 4525.51 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

