Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, merr family | BACDOR_03704 | Not Available | Positive | 4152004 - 4152570 | 22155.2 |
| site-specific recombinase, phage integrase family | BACDOR_03705 | Not Available | Positive | 4152567 - 4153814 | 48328.2 |
| hypothetical protein | BACDOR_03706 | Not Available | Positive | 4154051 - 4154779 | 28244.0 |
| dna binding domain, excisionase family | BACDOR_03707 | Not Available | Positive | 4154913 - 4155281 | 14432.2 |
| dna binding domain, excisionase family | BACDOR_03708 | Not Available | Positive | 4155325 - 4155666 | 13328.3 |
| hypothetical protein | BACDOR_03709 | Not Available | Positive | 4155663 - 4156775 | 42178.2 |
| chc2 zinc finger domain protein | BACDOR_03710 | Not Available | Positive | 4156976 - 4157875 | 34979.7 |
| hypothetical protein | BACDOR_03711 | Not Available | Positive | 4158032 - 4159003 | 36891.7 |
| hypothetical protein | BACDOR_03712 | Not Available | Positive | 4158991 - 4159770 | 29260.8 |
| ser/thr phosphatase family protein | BACDOR_03713 | Not Available | Positive | 4159767 - 4160537 | 29662.8 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

