Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubredoxin | BACDOR_03684 | Not Available | Positive | 4128018 - 4128569 | 20566.4 |
| thioredoxin | BACDOR_03685 | Not Available | Negative | 4128673 - 4129131 | 17119.0 |
| thioredoxin | BACDOR_03686 | Not Available | Negative | 4129135 - 4129431 | 11317.0 |
| outer membrane protein | BACDOR_03687 | Not Available | Negative | 4129704 - 4130315 | 23015.2 |
| hypothetical protein | BACDOR_03688 | Not Available | Negative | 4130338 - 4130565 | 8203.17 |
| xaa-his dipeptidase | BACDOR_03689 | Not Available | Positive | 4130781 - 4132244 | 53407.1 |
| endonuclease/exonuclease/phosphatase family protein | BACDOR_03690 | Not Available | Positive | 4132250 - 4133260 | 38208.8 |
| putative rrna large subunit m3psi methyltransferase rlmh | BACDOR_03691 | Not Available | Negative | 4133336 - 4133809 | 18399.6 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | BACDOR_03692 | Not Available | Positive | 4133890 - 4134741 | 31277.2 |
| transcriptional regulator, arac family | BACDOR_03693 | Not Available | Negative | 4134866 - 4137733 | 110503.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

