Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease domain, yopt-type | BACDOR_03564 | Not Available | Positive | 4007735 - 4009006 | 48738.9 |
| oxidoreductase, aldo/keto reductase family protein | BACDOR_03565 | Not Available | Positive | 4009009 - 4009845 | 32058.6 |
| hypothetical protein | BACDOR_03566 | Not Available | Positive | 4009857 - 4010831 | 38213.4 |
| n-acetylmuramoyl-l-alanine amidase | BACDOR_03567 | Not Available | Negative | 4011041 - 4011439 | 14719.7 |
| type vi secretion system effector, hcp1 family | BACDOR_03568 | Not Available | Negative | 4011604 - 4012077 | 16817.1 |
| hypothetical protein | BACDOR_03569 | Not Available | Positive | 4012358 - 4012597 | 9222.05 |
| toprim domain protein | BACDOR_03570 | Not Available | Negative | 4012706 - 4014712 | 74833.9 |
| hypothetical protein | BACDOR_03571 | Not Available | Negative | 4014818 - 4015861 | 39604.1 |
| hypothetical protein | BACDOR_03572 | Not Available | Positive | 4015985 - 4016137 | 5736.04 |
| hypothetical protein | BACDOR_03573 | Not Available | Positive | 4016155 - 4016289 | 5240.05 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

