Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BACDOR_03494 | Not Available | Positive | 3917866 - 3918426 | 21939.5 |
| outer membrane protein transport protein, ompp1/fadl/todx family | BACDOR_03495 | Not Available | Negative | 3918487 - 3919854 | 49212.4 |
| mate efflux family protein | BACDOR_03496 | Not Available | Positive | 3920459 - 3921781 | 48822.5 |
| signal recognition particle protein | BACDOR_03497 | Not Available | Positive | 3921880 - 3923202 | 48868.7 |
| tetrahydrofolate dehydrogenase/cyclohydrolase, nad(p)-binding domain protein | BACDOR_03498 | Not Available | Positive | 3923321 - 3924202 | 31626.8 |
| hypothetical protein | BACDOR_03499 | Not Available | Positive | 3924926 - 3925066 | 5180.07 |
| bacterial capsule synthesis protein | BACDOR_03500 | Not Available | Positive | 3925140 - 3926213 | 40967.7 |
| Trna-his | Not Available | Not Available | Positive | 3926289 - 3926362 | Not Available |
| rna polymerase sigma-70 factor | BACDOR_03502 | Not Available | Positive | 3926442 - 3927008 | 22678.5 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_03503 | Not Available | Positive | 3927081 - 3928160 | 41346.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

