Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | BACDOR_03394 | Not Available | Positive | 3785573 - 3786490 | 35688.8 |
| peptidase, u32 family | BACDOR_03395 | Not Available | Positive | 3786487 - 3788316 | 69926.0 |
| hypothetical protein | BACDOR_03396 | Not Available | Positive | 3788303 - 3789265 | 36819.0 |
| tonb-dependent receptor | BACDOR_03397 | Not Available | Negative | 3789501 - 3791924 | 91964.8 |
| transcriptional regulator, luxr family | BACDOR_03398 | Not Available | Negative | 3792094 - 3792738 | 24418.9 |
| dihydrolipoyl dehydrogenase | BACDOR_03399 | Not Available | Positive | 3792822 - 3794171 | 48289.8 |
| lipoyltransferase and lipoate-protein ligase | BACDOR_03400 | Not Available | Positive | 3794171 - 3794923 | 28835.7 |
| 2-oxo acid dehydrogenase acyltransferase (catalytic domain) | BACDOR_03401 | Not Available | Positive | 3794991 - 3796340 | 49100.9 |
| transketolase, c-terminal domain protein | BACDOR_03402 | Not Available | Positive | 3796369 - 3798402 | 75451.6 |
| flavodoxin | BACDOR_03403 | Not Available | Positive | 3798475 - 3798999 | 19475.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

