Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, small subunit | BACDOR_03364 | Not Available | Positive | 3739484 - 3740080 | 22389.5 |
| leua allosteric (dimerization) domain protein | BACDOR_03365 | Not Available | Positive | 3740059 - 3741594 | 57441.1 |
| 3-isopropylmalate dehydrogenase | BACDOR_03366 | Not Available | Positive | 3741698 - 3742759 | 39132.0 |
| antioxidant, ahpc/tsa family | BACDOR_03367 | Not Available | Positive | 3742891 - 3744036 | 42887.6 |
| peptide-methionine (s)-s-oxide reductase | BACDOR_03368 | Not Available | Negative | 3744105 - 3744590 | 18595.1 |
| tetratricopeptide repeat protein | BACDOR_03369 | Not Available | Positive | 3744783 - 3745562 | 29682.7 |
| atp-dependent dna helicase recq | BACDOR_03370 | Not Available | Negative | 3745674 - 3747491 | 69066.8 |
| hypothetical protein | BACDOR_03371 | Not Available | Positive | 3747823 - 3748290 | 18149.8 |
| peptidase family m49 | BACDOR_03372 | Not Available | Positive | 3748397 - 3750409 | 76530.1 |
| hypothetical protein | BACDOR_03373 | Not Available | Positive | 3750418 - 3751086 | 25616.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

