Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase a domain protein | BACDOR_03344 | Not Available | Negative | 3709080 - 3709313 | 8356.16 |
| hypothetical protein | BACDOR_03345 | Not Available | Negative | 3709298 - 3709699 | 16107.5 |
| hypothetical protein | BACDOR_03346 | Not Available | Negative | 3709915 - 3710565 | 25051.9 |
| polygalacturonase (pectinase) | BACDOR_03347 | Not Available | Positive | 3710787 - 3712193 | 52455.7 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_03348 | Not Available | Negative | 3712271 - 3716743 | 171900.0 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03349 | Not Available | Positive | 3716832 - 3720089 | 120805.0 |
| susd family protein | BACDOR_03350 | Not Available | Positive | 3720096 - 3721820 | 64488.3 |
| glycosyl hydrolase, family 43 | BACDOR_03351 | Not Available | Positive | 3721831 - 3724704 | 108444.0 |
| cobw/p47k family protein | BACDOR_03352 | Not Available | Negative | 3724776 - 3725999 | 46659.1 |
| alpha-l-fucosidase | BACDOR_03353 | Not Available | Positive | 3726149 - 3727474 | 50401.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

