Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase (pectinase) | BACDOR_03324 | Not Available | Positive | 3686468 - 3687772 | 49169.9 |
| hypothetical protein | BACDOR_03325 | Not Available | Negative | 3687924 - 3688445 | 19784.8 |
| alanine racemase | BACDOR_03326 | Not Available | Negative | 3688577 - 3691042 | 92734.8 |
| gscfa family protein | BACDOR_03327 | Not Available | Negative | 3691018 - 3692004 | 38511.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BACDOR_03328 | Not Available | Positive | 3692061 - 3693995 | 71792.0 |
| trka n-terminal domain protein | BACDOR_03329 | Not Available | Positive | 3694008 - 3695348 | 49220.3 |
| potassium uptake protein, trkh family | BACDOR_03330 | Not Available | Positive | 3695348 - 3696802 | 53574.4 |
| hypothetical protein | BACDOR_03331 | Not Available | Positive | 3696906 - 3697283 | 14727.8 |
| nadh-ubiquinone/plastoquinone oxidoreductase, chain 3 | BACDOR_03332 | Not Available | Positive | 3697387 - 3697737 | 13099.5 |
| nadh-quinone oxidoreductase, b subunit | BACDOR_03333 | Not Available | Positive | 3697728 - 3698324 | 22111.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

