Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACDOR_03314 | Not Available | Positive | 3667857 - 3669179 | 49806.6 |
| glycosyl hydrolase, family 43 | BACDOR_03315 | Not Available | Positive | 3669391 - 3670944 | 57901.0 |
| rna polymerase sigma-70 factor | BACDOR_03316 | Not Available | Positive | 3671111 - 3671692 | 23412.5 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_03317 | Not Available | Positive | 3671748 - 3672722 | 37090.5 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03318 | Not Available | Positive | 3672892 - 3676299 | 127333.0 |
| susd family protein | BACDOR_03319 | Not Available | Positive | 3676314 - 3678116 | 69759.6 |
| arylsulfatase | BACDOR_03320 | Not Available | Positive | 3678157 - 3679554 | 53407.7 |
| hypothetical protein | BACDOR_03321 | Not Available | Negative | 3679758 - 3680453 | 26774.1 |
| polygalacturonase (pectinase) | BACDOR_03322 | Not Available | Positive | 3680664 - 3683423 | 102688.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACDOR_03323 | Not Available | Positive | 3683521 - 3686433 | 109950.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

