Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BACDOR_03304 | Not Available | Negative | 3654593 - 3655180 | 22874.6 |
| hypothetical protein | BACDOR_03305 | Not Available | Negative | 3655275 - 3655532 | 9638.48 |
| hypothetical protein | BACDOR_03306 | Not Available | Negative | 3655669 - 3657030 | 52120.2 |
| putative dna-binding protein | BACDOR_03307 | Not Available | Positive | 3657359 - 3658039 | 25969.1 |
| rna polymerase sigma-70 factor | BACDOR_03309 | Not Available | Negative | 3658232 - 3658954 | 28761.9 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_03308 | Not Available | Positive | 3658943 - 3659956 | 38666.3 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03310 | Not Available | Positive | 3660249 - 3663431 | 119358.0 |
| susd family protein | BACDOR_03311 | Not Available | Positive | 3663444 - 3665138 | 63988.9 |
| hypothetical protein | BACDOR_03312 | Not Available | Positive | 3665330 - 3667603 | 87456.4 |
| hypothetical protein | BACDOR_03313 | Not Available | Positive | 3667581 - 3667727 | 5890.15 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

