Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACDOR_03284 | Not Available | Negative | 3609788 - 3611266 | 56087.6 |
| hypothetical protein | BACDOR_03285 | Not Available | Negative | 3611320 - 3612324 | 38087.6 |
| aldehyde dehydrogenase (nad) family protein | BACDOR_03286 | Not Available | Negative | 3612510 - 3613946 | 52461.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_03287 | Not Available | Negative | 3614139 - 3618392 | 162238.0 |
| polygalacturonase (pectinase) | BACDOR_03288 | Not Available | Negative | 3618518 - 3621067 | 95914.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACDOR_03289 | Not Available | Negative | 3621080 - 3624406 | 123911.0 |
| susd family protein | BACDOR_03290 | Not Available | Negative | 3624597 - 3626219 | 61860.9 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03291 | Not Available | Negative | 3626234 - 3629263 | 111791.0 |
| putative beta galactosidase small chain | BACDOR_03292 | Not Available | Negative | 3629456 - 3632371 | 110371.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACDOR_03293 | Not Available | Negative | 3632379 - 3635723 | 124916.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

