Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03264 | Not Available | Negative | 3572798 - 3575992 | 118187.0 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_03265 | Not Available | Negative | 3576153 - 3577085 | 35884.5 |
| rna polymerase sigma-70 factor | BACDOR_03266 | Not Available | Negative | 3577156 - 3577719 | 22502.1 |
| pectinesterase | BACDOR_03267 | Not Available | Negative | 3577784 - 3579331 | 56672.7 |
| hypothetical protein | BACDOR_03268 | Not Available | Negative | 3579367 - 3581913 | 95029.0 |
| hypothetical protein | BACDOR_03269 | Not Available | Negative | 3582106 - 3583758 | 63735.8 |
| glycosyl hydrolase, family 43 | BACDOR_03270 | Not Available | Negative | 3583751 - 3585250 | 56555.8 |
| susd family protein | BACDOR_03271 | Not Available | Negative | 3585260 - 3587116 | 68297.8 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03272 | Not Available | Negative | 3587327 - 3590737 | 125813.0 |
| bnr/asp-box repeat protein | BACDOR_03273 | Not Available | Negative | 3590985 - 3593006 | 76090.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

