Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor regulatory protein, fecr/pupr family | BACDOR_03074 | Not Available | Positive | 3343741 - 3344901 | 43986.5 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_03075 | Not Available | Positive | 3344957 - 3348274 | 122463.0 |
| susd family protein | BACDOR_03076 | Not Available | Positive | 3348283 - 3349785 | 56294.4 |
| thioredoxin | BACDOR_03077 | Not Available | Positive | 3349804 - 3350970 | 44514.2 |
| redoxin family protein | BACDOR_03078 | Not Available | Positive | 3350972 - 3352321 | 50458.3 |
| sodium ion-translocating decarboxylase, beta subunit | BACDOR_03079 | Not Available | Negative | 3352519 - 3353754 | 44269.9 |
| biotin-requiring enzyme | BACDOR_03080 | Not Available | Negative | 3353754 - 3355616 | 69014.9 |
| sodium pump decarboxylase, gamma subunit | BACDOR_03081 | Not Available | Negative | 3355647 - 3355898 | 8695.18 |
| nitroreductase family protein | BACDOR_03082 | Not Available | Negative | 3356167 - 3356673 | 19224.2 |
| putative phosphoglycolate phosphatase, bacterial | BACDOR_03083 | Not Available | Positive | 3356730 - 3357383 | 24337.2 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

