Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, s9a/b/c family, catalytic domain protein | BACDOR_03064 | Not Available | Positive | 3331152 - 3333353 | 83411.0 |
| lipoyl synthase | BACDOR_03065 | Not Available | Positive | 3333451 - 3334305 | 31740.3 |
| hypothetical protein | BACDOR_03066 | Not Available | Positive | 3334363 - 3335352 | 37679.9 |
| tetrapyrrole methylase family protein | BACDOR_03067 | Not Available | Negative | 3335368 - 3336075 | 26172.2 |
| hypothetical protein | BACDOR_03068 | Not Available | Negative | 3336096 - 3337097 | 38857.2 |
| hypothetical protein | BACDOR_03069 | Not Available | Negative | 3337105 - 3337962 | 31326.5 |
| polygalacturonase (pectinase) | BACDOR_03070 | Not Available | Positive | 3338339 - 3339958 | 59172.8 |
| hypothetical protein | BACDOR_03071 | Not Available | Positive | 3340097 - 3341311 | 45649.0 |
| glycosyl hydrolase, family 43 | BACDOR_03072 | Not Available | Positive | 3341325 - 3342989 | 61579.9 |
| rna polymerase sigma factor, sigma-70 family | BACDOR_03073 | Not Available | Positive | 3343090 - 3343674 | 23261.7 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

