Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybak/ebsc protein | BACDOR_02930 | Not Available | Negative | 3228371 - 3228856 | 17883.0 |
| excinuclease abc, a subunit | BACDOR_02931 | Not Available | Negative | 3228871 - 3231699 | 105969.0 |
| lysm domain protein | BACDOR_02932 | Not Available | Positive | 3231797 - 3233662 | 70730.9 |
| hypothetical protein | BACDOR_02933 | Not Available | Positive | 3233662 - 3234345 | 25745.0 |
| hypothetical protein | BACDOR_02934 | Not Available | Negative | 3234452 - 3234937 | 18148.3 |
| hypothetical protein | BACDOR_02935 | Not Available | Negative | 3235154 - 3235489 | 12965.3 |
| outer membrane assembly lipoprotein yfio | BACDOR_02936 | Not Available | Negative | 3235506 - 3236342 | 32450.3 |
| excinuclease abc, b subunit | BACDOR_02937 | Not Available | Positive | 3236509 - 3238542 | 77761.8 |
| phosphate-selective porin o and p | BACDOR_02938 | Not Available | Negative | 3238621 - 3239634 | 38637.0 |
| putative yigz family protein | BACDOR_02939 | Not Available | Negative | 3239827 - 3240429 | 22779.6 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

