Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | BACDOR_02529 | Not Available | Positive | 2796384 - 2797472 | 40618.5 |
| hypothetical protein | BACDOR_02530 | Not Available | Positive | 2797484 - 2798293 | 30753.6 |
| type iii restriction enzyme, res subunit | BACDOR_02531 | Not Available | Positive | 2798304 - 2799012 | 27144.7 |
| conserved hypothetical protein tigr03905 | BACDOR_02532 | Not Available | Negative | 2799137 - 2799382 | 9108.06 |
| dna-binding regulatory protein, yebc/pmpr family | BACDOR_02533 | Not Available | Negative | 2799384 - 2800124 | 27834.7 |
| phenylalanine--trna ligase, beta subunit | BACDOR_02534 | Not Available | Negative | 2800158 - 2802620 | 91178.0 |
| replicative dna helicase | BACDOR_02535 | Not Available | Negative | 2802774 - 2804390 | 59788.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BACDOR_02536 | Not Available | Positive | 2804592 - 2805419 | 30608.9 |
| hypothetical protein | BACDOR_02537 | Not Available | Negative | 2805494 - 2808373 | 110992.0 |
| uvrd/rep helicase | BACDOR_02538 | Not Available | Negative | 2808373 - 2811549 | 122697.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

