Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BACDOR_02309 | Not Available | Negative | 2588972 - 2590306 | 49917.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BACDOR_02310 | Not Available | Negative | 2590316 - 2591584 | 47043.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BACDOR_02311 | Not Available | Negative | 2591597 - 2593051 | 53381.4 |
| penicillin-binding protein, transpeptidase domain protein | BACDOR_02312 | Not Available | Negative | 2593070 - 2595250 | 80325.6 |
| hypothetical protein | BACDOR_02313 | Not Available | Negative | 2595255 - 2595650 | 15351.4 |
| s-adenosyl-methyltransferase mraw | BACDOR_02314 | Not Available | Negative | 2595634 - 2596548 | 34440.2 |
| putative protein mraz | BACDOR_02315 | Not Available | Negative | 2596545 - 2597009 | 18087.8 |
| acyltransferase | BACDOR_02316 | Not Available | Positive | 2597356 - 2598195 | 31828.9 |
| hemolysin | BACDOR_02317 | Not Available | Positive | 2598220 - 2599200 | 37477.4 |
| putative dgtpase | BACDOR_02318 | Not Available | Negative | 2599289 - 2600620 | 50267.5 |
Pathways
221 pathways
Health Effects
No health effects information available for this bacterium.

