Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | BACDOR_02059 | Not Available | Negative | 2295403 - 2297274 | 69610.1 |
| spfh/band 7/phb domain protein | BACDOR_02060 | Not Available | Negative | 2297421 - 2299121 | 62530.4 |
| hypothetical protein | BACDOR_02061 | Not Available | Negative | 2299147 - 2299680 | 20202.4 |
| hypothetical protein | BACDOR_02062 | Not Available | Positive | 2299697 - 2299825 | 4751.69 |
| translation metalloprotein ybey | BACDOR_02063 | Not Available | Negative | 2299915 - 2300331 | 15867.9 |
| outer membrane efflux protein | BACDOR_02064 | Not Available | Positive | 2300502 - 2301755 | 48055.2 |
| efflux transporter, rnd family, mfp subunit | BACDOR_02065 | Not Available | Positive | 2301780 - 2302877 | 40665.4 |
| heavy metal efflux pump, czca family | BACDOR_02066 | Not Available | Positive | 2302887 - 2306012 | 115204.0 |
| response regulator receiver domain protein | BACDOR_02067 | Not Available | Positive | 2306052 - 2306726 | 25755.4 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACDOR_02068 | Not Available | Positive | 2306771 - 2308123 | 51823.6 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

