Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | BACDOR_01999 | Not Available | Positive | 2235801 - 2236670 | 32622.6 |
| hypothetical protein | BACDOR_02000 | Not Available | Positive | 2236683 - 2236928 | 9145.44 |
| putative undecaprenyl-diphosphatase uppp | BACDOR_02001 | Not Available | Positive | 2236966 - 2237766 | 28538.1 |
| trna pseudouridine synthase b | BACDOR_02002 | Not Available | Positive | 2237771 - 2238478 | 26653.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BACDOR_02003 | Not Available | Positive | 2238490 - 2239545 | 40212.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BACDOR_02004 | Not Available | Positive | 2239564 - 2240010 | 16503.0 |
| tonb family domain protein | BACDOR_02005 | Not Available | Negative | 2240361 - 2241413 | 39144.5 |
| hypothetical protein | BACDOR_02006 | Not Available | Negative | 2241426 - 2242973 | 59922.6 |
| hypothetical protein | BACDOR_02007 | Not Available | Negative | 2242986 - 2243873 | 33479.7 |
| hypothetical protein | BACDOR_02008 | Not Available | Negative | 2243876 - 2244448 | 22459.1 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

