Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BACDOR_01719 | Not Available | Positive | 1915425 - 1918607 | 118036.0 |
| susd family protein | BACDOR_01720 | Not Available | Positive | 1918627 - 1920378 | 66165.7 |
| hypothetical protein | BACDOR_01721 | Not Available | Positive | 1920457 - 1922181 | 62650.6 |
| hypothetical protein | BACDOR_01723 | Not Available | Negative | 1922178 - 1922297 | 4125.15 |
| glycosyl hydrolase, family 43 | BACDOR_01722 | Not Available | Positive | 1922261 - 1924144 | 70425.4 |
| cysteine--trna ligase | BACDOR_01724 | Not Available | Positive | 1924535 - 1926016 | 56320.0 |
| phenylalanine and histidine ammonia-lyase | BACDOR_01725 | Not Available | Positive | 1926245 - 1927777 | 57427.5 |
| putative 3-oxoacyl-[acyl-carrier-protein] reductase | BACDOR_01726 | Not Available | Positive | 1927774 - 1928502 | 26326.7 |
| beta-ketoacyl synthase, c-terminal domain protein | BACDOR_01727 | Not Available | Positive | 1928483 - 1929739 | 45356.1 |
| putative acyl carrier protein | BACDOR_01728 | Not Available | Positive | 1929761 - 1930012 | 9579.46 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

