Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | BACDOR_01699 | Not Available | Positive | 1886038 - 1886991 | 35313.3 |
| kinase, pfkb family | BACDOR_01700 | Not Available | Positive | 1887135 - 1888199 | 38894.4 |
| export membrane protein secd | BACDOR_01701 | Not Available | Negative | 1888446 - 1891433 | 109218.0 |
| peptidase family m3 | BACDOR_01702 | Not Available | Negative | 1891612 - 1893660 | 77479.4 |
| endonuclease/exonuclease/phosphatase family protein | BACDOR_01703 | Not Available | Negative | 1893726 - 1894805 | 40431.1 |
| peptidase, s54 family | BACDOR_01704 | Not Available | Negative | 1894809 - 1895702 | 33946.6 |
| peptidase, s54 family | BACDOR_01705 | Not Available | Negative | 1895683 - 1896360 | 25419.6 |
| dna-binding protein hu | BACDOR_01706 | Not Available | Positive | 1896571 - 1896843 | 9312.3 |
| beta galactosidase small chain | BACDOR_01707 | Not Available | Positive | 1896924 - 1900265 | 126534.0 |
| toxin-antitoxin system, toxin component, fic family | BACDOR_01708 | Not Available | Positive | 1900437 - 1901300 | 33070.8 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

