Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, nad-binding domain protein | BACDOR_01159 | Not Available | Positive | 1296636 - 1297877 | 47373.9 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_01160 | Not Available | Negative | 1297999 - 1299009 | 38786.3 |
| rna polymerase sigma-70 factor | BACDOR_01161 | Not Available | Negative | 1299006 - 1299533 | 20725.7 |
| outer membrane insertion signal domain protein | BACDOR_01162 | Not Available | Negative | 1299588 - 1302155 | 97308.7 |
| beta galactosidase small chain | BACDOR_01163 | Not Available | Negative | 1302556 - 1305651 | 117525.0 |
| transporter, cation channel family protein | BACDOR_01164 | Not Available | Positive | 1305767 - 1306624 | 32646.8 |
| transglycosylase slt domain protein | BACDOR_01165 | Not Available | Negative | 1306650 - 1307669 | 38133.9 |
| transcriptional regulator, arac family | BACDOR_01166 | Not Available | Negative | 1307656 - 1308576 | 35152.7 |
| response regulator receiver domain protein | BACDOR_01167 | Not Available | Positive | 1308725 - 1312885 | 158149.0 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_01168 | Not Available | Positive | 1313107 - 1316097 | 111286.0 |
Pathways
348 pathways
Health Effects
No health effects information available for this bacterium.

