Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, luxr family | BACDOR_01129 | Not Available | Positive | 1262047 - 1262817 | 29516.6 |
| hypothetical protein | BACDOR_01130 | Not Available | Negative | 1262836 - 1263420 | 22892.4 |
| mate efflux family protein | BACDOR_01131 | Not Available | Negative | 1263535 - 1264827 | 48707.1 |
| hypothetical protein | BACDOR_01132 | Not Available | Negative | 1265043 - 1265879 | 32224.9 |
| leucyltransferase | BACDOR_01133 | Not Available | Negative | 1266022 - 1266675 | 24880.0 |
| putative atp-dependent clp protease atp-binding subunit clpa | BACDOR_01134 | Not Available | Negative | 1266763 - 1269000 | 83373.0 |
| atp-dependent clp protease adaptor protein clps | BACDOR_01135 | Not Available | Negative | 1269018 - 1269341 | 12557.1 |
| hypothetical protein | BACDOR_01136 | Not Available | Positive | 1269799 - 1270494 | 26746.7 |
| putative alpha-1,2-mannosidase | BACDOR_01137 | Not Available | Positive | 1270570 - 1272810 | 84397.0 |
| rna polymerase sigma-70 factor | BACDOR_01138 | Not Available | Positive | 1272914 - 1273582 | 25999.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

