Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BACDOR_00079 | Not Available | Positive | 90489 - 93758 | 122304.0 |
| susd family protein | BACDOR_00080 | Not Available | Positive | 93769 - 95475 | 64989.9 |
| response regulator receiver domain protein | BACDOR_00081 | Not Available | Positive | 95652 - 99974 | 164884.0 |
| hypothetical protein | BACDOR_00082 | Not Available | Positive | 100139 - 101743 | 62001.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BACDOR_00083 | Not Available | Positive | 101865 - 102479 | 22170.7 |
| transcriptional regulator, deor family | BACDOR_00084 | Not Available | Positive | 102491 - 103246 | 27350.1 |
| transketolase, thiamine diphosphate binding domain protein | BACDOR_00085 | Not Available | Positive | 103589 - 104434 | 31441.6 |
| transketolase, c-terminal domain protein | BACDOR_00086 | Not Available | Positive | 104424 - 105362 | 33626.6 |
| putative glycerol kinase | BACDOR_00087 | Not Available | Positive | 105388 - 106884 | 55175.4 |
| l-fucose isomerase domain protein | BACDOR_00088 | Not Available | Positive | 106918 - 108342 | 52314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

