Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | BACDOR_00979 | Not Available | Negative | 1148206 - 1149366 | 42735.3 |
| amino acid kinase family | BACDOR_00980 | Not Available | Negative | 1149474 - 1150793 | 49296.1 |
| abc transporter, atp-binding protein | BACDOR_00981 | Not Available | Negative | 1150901 - 1151659 | 28506.3 |
| phosphoribosyl-atp diphosphatase | BACDOR_00982 | Not Available | Negative | 1151661 - 1152272 | 23196.7 |
| imidazoleglycerol phosphate synthase, cyclase subunit | BACDOR_00983 | Not Available | Negative | 1152438 - 1153193 | 27227.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BACDOR_00984 | Not Available | Negative | 1153203 - 1153922 | 26581.2 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | BACDOR_00985 | Not Available | Negative | 1153964 - 1154554 | 22284.8 |
| formyltetrahydrofolate deformylase | BACDOR_00986 | Not Available | Negative | 1154554 - 1155411 | 33302.5 |
| Trna-asp | Not Available | Not Available | Positive | 1155676 - 1155752 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1155782 - 1155858 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

