Dethiosulfovibrio peptidovorans DSM 11002

rod

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Dethiosulfovibrionaceae

Genus

Dethiosulfovibrio

Description

Dethiosulfovibrio peptidovorans DSM 11002 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number ABTR00000000.2. As a member of the Dethiosulfovibrio genus, this species is expected to play a role in the biogeochemical cycles involving sulfur compounds, given the general metabolic capabilities of related bacteria. Although specific metabolic pathways and ecological roles of Dethiosulfovibrio peptidovorans are not detailed in the provided traits, the presence of this organism suggests a potential involvement in the degradation of organic matter and sulfur transformations in its environment. The unique characteristics of Dethiosulfovibrio peptidovorans, such as its Gram-negative structure and rod morphology, indicate its adaptability to various environments, which may include anaerobic or microaerophilic conditions typically found in sediments and the gastrointestinal tracts of some animals. Understanding the ecological role of this organism can offer insights into microbial interactions within its habitat, particularly in the context of nutrient cycling and the maintenance of ecosystem health.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyDethiosulfovibrionaceae
GenusDethiosulfovibrio
SpeciesDethiosulfovibrio peptidovorans
StrainDSM 11002

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dethiosulfovibrio peptidovorans DSM 11002


Gene Summary

Adenine Count

580915 bp

Thymine Count

593499 bp

Guanine Count

697653 bp

Cytosine Count

704292 bp

Genome Length

2576359 bp

Protein-coding Genes

2458 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDpep_0001Not AvailableNegative1 - 32712070.8
hypothetical proteinDpep_0002Not AvailableNegative340 - 136536437.7
hypothetical proteinDpep_0003Not AvailableNegative1368 - 170012936.3
hypothetical proteinDpep_0004Not AvailableNegative1700 - 418990598.4
hypothetical proteinDpep_0005Not AvailableNegative4186 - 664588743.8
hypothetical proteinDpep_0006Not AvailableNegative6645 - 742128172.8
hypothetical proteinDpep_0007Not AvailableNegative7425 - 778713402.6
phage tail tape measure protein, tp901 familyDpep_0008Not AvailableNegative7801 - 1042894643.2
protein of unknown function duf1044Dpep_0009Not AvailablePositive10577 - 1091212296.8
transcriptional regulator, xre familyDpep_0010Not AvailablePositive10909 - 1121111282.7

Displaying genes 1 – 10 of 2517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

158 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 158 metabolites

Health Effects

No health effects information available for this bacterium.