[Ruminococcus] lactaris ATCC 29176

Gram-positiveCoccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] lactaris ATCC 29176 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This species is part of the diverse microbiota found in the gastrointestinal tract, where it plays a significant role in the fermentation of complex carbohydrates. Notably, [Ruminococcus] lactaris possesses flagella, which may contribute to its motility in anaerobic environments. The strain has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation within its ecological niche. The accession number for this strain is ABOU00000000.2, which provides a reference point for researchers seeking to access genetic and genomic information about this organism. The anaerobic nature of [Ruminococcus] lactaris suggests its ecological role in an oxygen-depleted environment, such as the intestines of ruminants and other mammals. The ability to thrive in such conditions is crucial for its involvement in the degradation of dietary fibers and other complex polysaccharides, which are essential for the host's nutrient absorption and overall health. Thus, [Ruminococcus] lactaris ATCC 29176 exemplifies the importance of anaerobic bacteria in the digestive processes of higher organisms, highlighting the intricate relationships between gut microbiota and their hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
Species[Ruminococcus] lactaris
StrainATCC 29176

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] lactaris ATCC 29176
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] lactaris ATCC 29176 R_lactaris-2.0.1_Cont93.1,

Gene Summary

Adenine Count

799145 bp

Thymine Count

765074 bp

Guanine Count

605584 bp

Cytosine Count

559932 bp

Genome Length

2729735 bp

Protein-coding Genes

2719 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna(ile)-lysidine synthetaseRUMLAC_01102Not AvailablePositive1022366 - 102386257402.1
hypoxanthine phosphoribosyltransferaseRUMLAC_01103Not AvailablePositive1023867 - 102439419616.8
atp-dependent metallopeptidase hflbRUMLAC_01104Not AvailablePositive1024411 - 102624967251.7
alpha amylase, catalytic domain proteinRUMLAC_01105Not AvailablePositive1026397 - 102845179329.5
hypothetical proteinRUMLAC_01106Not AvailableNegative1028561 - 102910318594.2
f5/8 type c domain proteinRUMLAC_01107Not AvailableNegative1029251 - 1034218182937.0
hypothetical proteinRUMLAC_01108Not AvailableNegative1034332 - 103476316004.1
hypothetical proteinRUMLAC_01109Not AvailableNegative1034792 - 10349205045.45
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligaseRUMLAC_01110Not AvailablePositive1034982 - 103620244507.1
pantothenate kinase, type iiiRUMLAC_01111Not AvailablePositive1036186 - 103698028382.9

Displaying genes 1171 – 1180 of 2823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

313 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 313 metabolites

Health Effects

No health effects information available for this bacterium.