Burkholderia ambifaria IOP40-10

Gram-negativeRodNon-motileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia ambifaria IOP40-10 is a gram-negative, rod-shaped bacterium classified as a facultative aerobe. This organism is characterized by its non-motile nature despite the presence of flagella, which suggests that it may utilize its flagella for other functions rather than mobility. B. ambifaria IOP40-10 thrives optimally at a temperature of 30°C, indicating that it is mesophilic and capable of growing within a specific temperature range suited to moderate environmental conditions. This bacterium is free-living, indicating that it does not rely on a host organism for survival and can inhabit multiple environments. Its structure includes two membranes and a single replicon, which is typical for gram-negative bacteria and contributes to its cellular integrity and function. Importantly, B. ambifaria IOP40-10 does not undergo sporulation, which means it does not form spores as a means of survival under adverse conditions. In ecological terms, the free-living nature of Burkholderia ambifaria IOP40-10 allows it to play a role in various ecosystems, potentially influencing nutrient cycling and interacting with other microbial communities. Its adaptability to different habitats and its mesophilic characteristics suggest that it may be well-suited to thrive in environments where moderate temperatures prevail, contributing to the biodiversity and resilience of microbial life in those settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia ambifaria
StrainIOP40-10

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Burkholderia ambifaria IOP40-10
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia ambifaria IOP40-10 ctg00514, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6923 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxybenzoate 3-monooxygenaseBamIOP4010DRAFT_0060Not AvailablePositive64067 - 6529945596.8
3-oxoacid coa-transferase, a subunitBamIOP4010DRAFT_0061Not AvailablePositive65444 - 6616025129.3
3-oxoacid coa-transferase, b subunitBamIOP4010DRAFT_0062Not AvailablePositive66180 - 6683623149.7
3-carboxy-cis,cis-muconate cycloisomeraseBamIOP4010DRAFT_0063Not AvailablePositive66925 - 6829247988.8
3-oxoadipate enol-lactonaseBamIOP4010DRAFT_0064Not AvailablePositive68307 - 6909228078.4
4-carboxymuconolactone decarboxylaseBamIOP4010DRAFT_0065Not AvailablePositive69103 - 6948914495.2
major facilitator superfamily mfs_1BamIOP4010DRAFT_0066Not AvailablePositive69712 - 7107047536.6
conserved hypothetical proteinBamIOP4010DRAFT_0067Not AvailableNegative71195 - 714439489.29
lysine exporter protein (lyse/ygga)BamIOP4010DRAFT_0068Not AvailableNegative71551 - 7216822415.4
istb domain protein atp-binding proteinBamIOP4010DRAFT_0069Not AvailableNegative72531 - 7314822744.5

Displaying genes 61 – 70 of 6979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.