Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | DSM 17136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1246873 bp
Thymine Count
1250211 bp
Guanine Count
898938 bp
Cytosine Count
899595 bp
Genome Length
4295617 bp
Protein-coding Genes
4284 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa, 67k type | BACCOP_00445 | Not Available | Negative | 395972 - 397738 | 65089.1 |
| hypothetical protein | BACCOP_00446 | Not Available | Positive | 397928 - 398170 | 9371.61 |
| hypothetical protein | BACCOP_00447 | Not Available | Positive | 398342 - 398752 | 15720.5 |
| efflux abc transporter, permease protein | BACCOP_00448 | Not Available | Negative | 398840 - 401200 | 89692.6 |
| efflux abc transporter, permease protein | BACCOP_00449 | Not Available | Negative | 401212 - 403563 | 89390.2 |
| efflux transporter, rnd family, mfp subunit | BACCOP_00450 | Not Available | Negative | 403576 - 404826 | 48098.7 |
| outer membrane efflux protein | BACCOP_00451 | Not Available | Negative | 404841 - 406199 | 51583.5 |
| sigma-54 interaction domain protein | BACCOP_00452 | Not Available | Positive | 406400 - 407776 | 51562.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACCOP_00453 | Not Available | Positive | 407766 - 409070 | 48410.3 |
| hypothetical protein | BACCOP_00454 | Not Available | Negative | 409083 - 409490 | 14902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

