Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | DSM 17136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1246873 bp
Thymine Count
1250211 bp
Guanine Count
898938 bp
Cytosine Count
899595 bp
Genome Length
4295617 bp
Protein-coding Genes
4284 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase (pectinase) | BACCOP_03343 | Not Available | Positive | 3218812 - 3220260 | 54142.0 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | BACCOP_03344 | Not Available | Negative | 3220654 - 3221055 | 15168.2 |
| hypothetical protein | BACCOP_03345 | Not Available | Negative | 3221250 - 3221672 | 15033.0 |
| sigma-70 region 2 | BACCOP_03346 | Not Available | Positive | 3221815 - 3222360 | 21241.1 |
| hypothetical protein | BACCOP_03347 | Not Available | Positive | 3222363 - 3222725 | 14227.1 |
| acyl-coa dehydrogenase, c-terminal domain protein | BACCOP_03348 | Not Available | Negative | 3222820 - 3224526 | 63874.9 |
| electron transfer flavoprotein fad-binding domain protein | BACCOP_03349 | Not Available | Negative | 3224526 - 3225545 | 37029.7 |
| electron transfer flavoprotein domain protein | BACCOP_03350 | Not Available | Negative | 3225551 - 3226438 | 31603.9 |
| antioxidant, ahpc/tsa family | BACCOP_03351 | Not Available | Negative | 3226558 - 3227088 | 20097.8 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | BACCOP_03352 | Not Available | Positive | 3227174 - 3228367 | 45402.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

