Thomasclavelia spiroformis DSM 1552

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Thomasclavelia

Description

Thomasclavelia spiroformis DSM 1552 is a Gram-positive, anaerobic bacterium characterized by its rod-shaped morphology. This species is notable for its flagella presence, which aids in motility under anaerobic conditions. The bacterium has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific environments. As an anaerobe, Thomasclavelia spiroformis thrives in oxygen-deprived environments, suggesting potential ecological roles in habitats such as the gastrointestinal tracts of animals or other anoxic ecosystems. Its ability to move via flagella may enhance its survival and colonization in these niches, allowing it to navigate through complex microbial communities. The accession number for this organism is ABIK00000000.2, which provides a reference point for researchers interested in studying its genetics and biological functions. Understanding the characteristics of Thomasclavelia spiroformis can provide insights into its ecological significance, particularly in the context of microbial interactions in anaerobic environments. The study of such organisms is crucial for comprehending the dynamics of microbial communities and their roles in biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusThomasclavelia
SpeciesThomasclavelia spiroformis
StrainDSM 1552

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thomasclavelia spiroformis DSM 1552
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thomasclavelia spiroformis DSM 1552 C_spiroforme-2.0.1_Cont346,

Gene Summary

Adenine Count

898620 bp

Thymine Count

892320 bp

Guanine Count

368364 bp

Cytosine Count

348181 bp

Genome Length

2507485 bp

Protein-coding Genes

2465 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolaseCLOSPI_01230P45694Positive1195987 - 119796372669.6
hypothetical proteinCLOSPI_01231Not AvailablePositive1198063 - 119845515721.2
hypothetical proteinCLOSPI_01232Q6KHJ9Positive1198459 - 11986627851.27
phosphoglycerate mutase family proteinCLOSPI_01233B2VH13Positive1198686 - 119930624200.9
acyl-phosphate glycerol 3-phosphate acyltransferaseCLOSPI_01234Q81N43Negative1199505 - 120011021868.9
dna topoisomerase iv, b subunitCLOSPI_01235Q59192Positive1200271 - 120219971577.4
dna topoisomerase iv, a subunitCLOSPI_01236Q45066Positive1202212 - 120476196837.6
rna polymerase sigma-k factorCLOSPI_01237P62182Negative1204774 - 120546026442.1
ribosome biogenesis gtpase yqehCLOSPI_01238P54453Positive1205594 - 120669141441.1
rna-binding protein, yhby familyCLOSPI_01239P0AGK6Positive1206706 - 120699310559.1

Displaying genes 1241 – 1250 of 2535 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

114 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 114 metabolites

Health Effects

No health effects information available for this bacterium.