Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Pseudoflavonifractor |
| Species | Pseudoflavonifractor capillosus |
| Strain | ATCC 29799 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
867304 bp
Thymine Count
867049 bp
Guanine Count
1248625 bp
Cytosine Count
1258875 bp
Genome Length
4241853 bp
Protein-coding Genes
4833 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | BACCAP_02910 | B2UYK8 | Positive | 2525403 - 2526467 | 37850.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | BACCAP_02911 | B9DZT0 | Positive | 2526464 - 2527699 | 43618.0 |
| chorismate synthase | BACCAP_02912 | E3PV41 | Positive | 2527727 - 2528704 | 34091.8 |
| prephenate dehydratase | BACCAP_02913 | Q9ZUY3 | Positive | 2528762 - 2529931 | 43754.9 |
| shikimate kinase | BACCAP_02914 | Q67N09 | Positive | 2529928 - 2530428 | 18270.0 |
| 3-dehydroquinate dehydratase, type ii | BACCAP_02915 | A7GSL7 | Positive | 2530425 - 2530880 | 16482.6 |
| shikimate dehydrogenase | BACCAP_02916 | A6TM69 | Positive | 2530956 - 2531819 | 31221.7 |
| resolvase, n-terminal domain protein | BACCAP_02917 | Not Available | Negative | 2532006 - 2533553 | 59670.4 |
| hypothetical protein | BACCAP_02918 | Not Available | Negative | 2533714 - 2533875 | 6079.17 |
| hypothetical protein | BACCAP_02919 | Not Available | Negative | 2533966 - 2535630 | 61818.3 |
Pathways
1107 pathways
Health Effects
No health effects information available for this bacterium.

