Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatase pap2 family proteinPATL_RS20875Not AvailablePositive4895148 - 489565719098.7
mj1255/vc2487 family glycosyltransferasePATL_RS20880Not AvailablePositive4895741 - 489681740933.9
lps translocon maturation chaperone lptmPATL_RS22750Not AvailablePositive4896980 - 48971506187.5
diaminopimelate decarboxylasePATL_RS20885Not AvailablePositive4897152 - 489839945214.1
diaminopimelate epimerasePATL_RS20890Not AvailablePositive4898586 - 489941630406.6
duf484 family proteinPATL_RS20895Not AvailablePositive4899413 - 490011126226.6
tyrosine recombinase xercPATL_RS20900Not AvailablePositive4900127 - 490102333748.8
had-ia family hydrolasePATL_RS20905Not AvailablePositive4901071 - 490178726979.0
serine o-acetyltransferasePATL_RS20910Not AvailableNegative4901884 - 490266328218.2
dna helicase iiPATL_RS20915Not AvailablePositive4902812 - 490498682606.3

Displaying genes 4201 – 4210 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.