Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Alteromonadales
Family	Alteromonadaceae
Genus	Paraglaciecola
Species	Paraglaciecola sp. T6c
Strain	No strain

Profile

Physiology
Gram staining properties	Gram-negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

NC_008228.1

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
sdr family nad(p)-dependent oxidoreductase	PATL_RS20825	Not Available	Negative	4884923 - 4885684	28127.7
thiol-disulfide oxidoreductase dcc family protein	PATL_RS20830	Not Available	Negative	4885681 - 4886106	16582.0
peptide-methionine (s)-s-oxide reductase msra	PATL_RS20835	Not Available	Positive	4886275 - 4886817	20323.6
hypothetical protein	PATL_RS20840	Not Available	Negative	4886814 - 4887983	42718.9
glycoside hydrolase family 2 tim barrel-domain containing protein	PATL_RS20845	Not Available	Negative	4888127 - 4891264	119866.0
nuclear transport factor 2 family protein	PATL_RS20850	Not Available	Positive	4891556 - 4892017	16806.3
flavodoxin fldb	PATL_RS20855	Not Available	Positive	4892146 - 4892694	20883.2
clca_x family protein	PATL_RS20860	Not Available	Positive	4892691 - 4893491	30230.9
exbd/tolr family protein	PATL_RS20865	Not Available	Positive	4893888 - 4894295	14773.0
ribonuclease e activity regulator rraa	PATL_RS20870	Not Available	Negative	4894456 - 4894941	17006.2

Displaying genes 4191 – 4200 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.