Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-amino acid aminotransferasePATL_RS20630Not AvailablePositive4847494 - 484835131899.9
alanine racemasePATL_RS20635Not AvailablePositive4848361 - 484948840262.8
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobPATL_RS20640Not AvailableNegative4849503 - 485047437551.2
carboxy-s-adenosyl-l-methionine synthase cmoaPATL_RS20645Not AvailableNegative4850510 - 485124127160.0
luxr c-terminal-related transcriptional regulatorPATL_RS20650Not AvailablePositive4851513 - 485215123548.7
duf5610 domain-containing proteinPATL_RS20655Not AvailableNegative4852228 - 485366152524.4
trna (uridine(54)-c5)-methyltransferase trmaPATL_RS20660Not AvailablePositive4853810 - 485490742132.4
hth-type transcriptional repressor fabrPATL_RS20665Not AvailableNegative4854904 - 485550322005.6
acyl-coa desaturasePATL_RS20670Not AvailablePositive4855663 - 485679044533.4
hypothetical proteinPATL_RS20675Not AvailableNegative4856980 - 485730611985.4

Displaying genes 4151 – 4160 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.