Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_03202PATL_RS16220Not AvailablePositive3802899 - 3803858Not Available
peptidylprolyl isomerasePATL_RS16225Not AvailablePositive3803927 - 380441217761.6
p-ii family nitrogen regulatorPATL_RS16230Not AvailableNegative3804517 - 380485512501.2
ammonia-dependent nad(+) synthetasePATL_RS16235Not AvailableNegative3804880 - 380571030179.8
prepilin-type n-terminal cleavage/methylation domain-containing proteinPATL_RS16240Not AvailableNegative3805809 - 380747361497.7
hypothetical proteinPATL_RS16245Not AvailableNegative3807474 - 380861341511.9
prepilin cleavage proteinPATL_RS16250Not AvailableNegative3808600 - 380923222938.3
gsph/fimt family pseudopilinPATL_RS16255Not AvailableNegative3809226 - 380974418855.0
type iv pilin proteinPATL_RS16260Not AvailablePositive3809971 - 381036314734.8
gsph/fimt family pseudopilinPATL_RS16265Not AvailablePositive3810459 - 381103120466.0

Displaying genes 3271 – 3280 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.